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I2E Text Mining Software Overview Linguamatics I2E Solution Overview
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Case studies, datasheets, documentation & analyst reports on semantic search and text mining in life sciences available for download

Featured Report: "Semantic Software Technologies: Landscape of High Value Applications for the Enterprise"

This study, published by Gilbane Group, a division of Outsell Inc, covers areas including: the growing need for semantic software to meaningfully manage the rapidly increasing volumes of unstructured data and information; the various solutions available and how these are improving and maturing; and an overview of the tangible benefits seen by adopters of these technologies. The Linguamatics Deep Dive, by the same author, highlights Linguamatics' leadership position in the life sciences market with I2E.

Gilbane Semantic Software Technologies Study

Gilbane Semantic Software Technologies Study [download PDF]

Gilbane Linguamatics Deep Dive

Gilbane Linguamatics Deep Dive [download PDF]

Company Factsheet

Creating a target selection framework with Linguamatics I2E at AstraZeneca [download PDF]

I2E Case Studies: Text Mining for Life Science

These case studies show how I2E has been used to capture valuable information from life sciences literature in a number of important application areas, saving time and increasing productivity

Creating a target selection framework with Linguamatics I2E at AstraZeneca [download PDF]

Creating a Target Selection Framework with Linguamatics I2E at AstraZeneca

A case study from Pfizer RTC where I2E was used for target prioritization [download PDF]

A case study from Pfizer RTC where I2E was used for target prioritization.

Two specific case studies from AstraZeneca and Biowisdom covering the reconstruction of a biological pathway and the identification of nuclear co-factors [download PDF]

Two specific case studies from AstraZeneca and Biowisdom covering the reconstruction of a biological pathway and the identification of nuclear co-factors.

Two specific case studies from AstraZeneca and Biowisdom covering the reconstruction of a biological pathway and the identification of nuclear co-factors. [download PDF]

Text mining in a biotech setting at Syntaxin

Text mining in a biotech setting at Syntaxin. [download PDF]

 

I2E Datasheets

Interactive Information Extraction (I2E) can be used in diverse application areas such as systems biology, biomarker detection, safety/tox and drug repositioning in pharmaceutical R&D to key opinion leader, sentiment and competitive analysis for business intelligence. I2E's powerful NLP capabilities mine large collections of documents, extracting relevant facts and relationships from unstructured and semi-structured content such as scientific papers, internal project reports, patent documents, or news feeds.

Linguamatics I2E: Solution Overview

I2E Text Mining Software Solution Overview [download PDF]

I2E Datasheet

I2E Text Mining Software Datasheet [download PDF]

I2E OnDemand Datasheet

I2E OnDemand Text Mining Software Datasheet [download PDF]

I2E Pipeline Pilot Components Datasheet

I2E Pipeline Pilot Components Datasheet [download PDF]

Linguamatics in Healthcare

Linguamatics in Healthcare
                    [download PDF]

I2E ChiKEL (Chemically Informed Knowledge Extraction from Literature)

I2E Pipeline Pilot Components Datasheet [download PDF]

Insights and Intelligence from Text using Linguamatics I2E (white paper)
Business and research organizations face a huge challenge to unlock the meaning within text to inform business critical decision making.  This white paper describes how Linguamatics I2E Linguamatics is at the forefront of a new generation of knowledge discovery technology.

Insights and Intelligence from Text using Linguamatics I2E Text Mining Software [download PDF]

 

Selected Publications

Automated identification of pneumonia in chest radiograph reports in critically ill patients
Vincent Liu, Mark P Clark, Mark Mendoza, Ramin Saket, Marla N Gardner, Benjamin J Turk and Gabriel J Escobar. 2013

Pneumonia [visit publisher site]
Automated identification of pneumonia in chest radiograph reports in critically ill patients [download PDF]


CALBC Silver Standard Corpus
Rebholz-Schuhmann et al.
Journal of Bioinformatics and Computational Biology, Vol. 8, Issue 1, pp. 163-179 (2010)

CALBC Silver Standard Corpus [view at WorldSciNet]

 

Mining Protein-Protein Interactions from Published Literature Using Linguamatics I2E
Bandy, J., Milward, D., McQuay, S. Methods Mol. Biol. 2009

Mining Protein-Protein Interactions from Published Literature Using I2E Text Mining Software [view in PubMed]

 

Mapping similarities in mTOR pathway perturbations in mouse lupus nephritis models and human lupus nephritis
Padmalatha S Reddy, Holly M Legault et al.
Arthritis Research & Therapy 2008 (doi:10.1186/ar2541)

Mapping similarities in mTOR pathway perturbations in mouse lupus nephritis models and human lupus nephritis [visit publisher site]
Mapping similarities in mTOR pathway perturbations in mouse lupus nephritis models and human lupus nephritis [download PDF]

 

Identifying and classifying biomedical perturbations in text
Raul Rodriguez-Esteban; Phoebe M. Roberts; Matthew E. Crawford
Nucleic Acids Research 2008 (doi: 10.1093/nar/gkn986)

Identifying and classifying biomedical perturbations in text [visit publisher site]
Identifying and classifying biomedical perturbations in text [download PDF]


Early Identification of Potential Drug Safety Issues from Diverse Literature Resources
Sarah J McQuay
Pharma-Bio-Med 2008

Early Identification of Potential Drug Safety Issues from Diverse Literature Resources [download PDF]


Text Data Mining using Interactive Information Extraction
David Milward and Paul Milligan
BioLINK SIG Text Mining Workshop, ISMB/ECCB 2007

Text Data Mining using Interactive Information Extraction [download PDF]


Flexible Text Mining Strategies for Drug Discovery
David Milward et al.
Proc. Second International Symposium on Semantic Mining in BioMedicine (SMBM 2006), pp. 101-104

Flexible Text Mining Strategies for Drug Discovery [download PDF]


Text Mining: getting more value from literature resources
Roger Hale
Drug Discovery Today, Vol. 10, Issue 6, pp. 377-379 (15 March 2005)

Text Mining: getting more value from literature resource [download PDF]


Ontology-based Interactive Information Extraction from Scientific Abstracts
David Milward et al.
BioLINK SIG Text Mining Workshop, ISMB/ECCB 2004

Ontology-based Interactive Information Extraction from Scientific Abstracts [download PDF]


Automatic Extraction of Protein Interactions from Scientific Abstracts
James Thomas et al.
Pacific Symposium on Biocomputing 2000

Automatic Extraction of Protein Interactions from Scientific Abstracts [download zipped PDF]


From Information Retrieval to Information Extraction
David Milward and James Thomas
ACL 2000 Workshop on Recent Advances in Natural Language Processing and Information Retrieval

From Information Retrieval to Information Extraction [download zipped PDF]
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