Publications

A CTD-Pfizer collaboration: manual curation of 88,000 scientific articles text mined for drug-disease and drug-phenotype interactions

Davis AP, Wiegers TC, Roberts PM, King BL, Lay JM, Lennon-Hopkins K, Sciaky D, Johnson R, Keating H, Greene N, Hernandez R, McConnell KJ, Enayetallah AE, Mattingly CJ.

Database (Oxford). 2013 Nov; 2013:bat080

PMID: 24288140

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3842776


Clarifying the social media blur

Milward D, Singh G

Information Outlook. 2012 Mar; 16(2): 10-13

PMID: N/A

http://www.sla.org/IO/2012/March-April/IOMarApr2012.pdf

Abstract

By using powerful filters to extract key information, library professionals can mine noisy ‘big data’ and help their organizations understand and influence stakeholders.


PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse

Hornbeck PV, Kornhauser JM, Tkachev S, Zhang B, Skrzypek E, Murray B, Latham V, Sullivan M.

Nucleic Acids Res. 2012 Jan; 40(Database issue):D261-70

PMID: 22135298

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245126


Text mining for the biocuration workflow

Hirschman L, Burns GA, Krallinger M, Arighi C, Cohen KB, Valencia A, Wu CH, Chatr-Aryamontri A, Dowell KG, Huala E, Lourenço A, Nash R, Veuthey AL,Wiegers T, Winter AG.

Database (Oxford). 2012 Apr; 2012:bas020

PMID: 22513129

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3328793


Dynamic changes in the microRNA expression profile reveal multiple regulatory mechanisms in the spinal nerve ligation model of neuropathic pain

von Schack D, Agostino MJ, Murray BS, Li Y, Reddy PS, Chen J, Choe SE, Strassle BW, Li C, Bates B, Zhang L, Hu H, Kotnis S, Bingham B, Liu W, Whiteside GT, Samad TA, Kennedy JD, Ajit SK.

PLoS One. 2011 Mar; 6(3):e17670

PMID: 21423802

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3056716