Publications

Entity recognition in parallel multi-lingual biomedical corpora: the CLEF-ER laboratory overview

Dietrich Rebholz-Schuhmann, Simon Clematide, Fabio Rinaldi, Senay Kafkas, Erik M. van Mulligen, Chinh Bui, Johannes Hellrich, Ian Lewin, David Milward, Michael Poprat, Antonio Jimeno-Yepes, Udo Hahn, Jan A. Kors

Lecture Notes in Computer Science. 2013; 8138:353-367

PMID: N/A

http://link.springer.com/chapter/10.1007%2F978-3-642-40802-1_32


A CTD-Pfizer collaboration: manual curation of 88,000 scientific articles text mined for drug-disease and drug-phenotype interactions

Davis AP, Wiegers TC, Roberts PM, King BL, Lay JM, Lennon-Hopkins K, Sciaky D, Johnson R, Keating H, Greene N, Hernandez R, McConnell KJ, Enayetallah AE, Mattingly CJ.

Database (Oxford). 2013 Nov; 2013:bat080

PMID: 24288140

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3842776


Clarifying the social media blur

Milward D, Singh G

Information Outlook. 2012 Mar; 16(2): 10-13

PMID: N/A

http://www.sla.org/IO/2012/March-April/IOMarApr2012.pdf

Abstract

By using powerful filters to extract key information, library professionals can mine noisy ‘big data’ and help their organizations understand and influence stakeholders.


PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse

Hornbeck PV, Kornhauser JM, Tkachev S, Zhang B, Skrzypek E, Murray B, Latham V, Sullivan M.

Nucleic Acids Res. 2012 Jan; 40(Database issue):D261-70

PMID: 22135298

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245126


Text mining for the biocuration workflow

Hirschman L, Burns GA, Krallinger M, Arighi C, Cohen KB, Valencia A, Wu CH, Chatr-Aryamontri A, Dowell KG, Huala E, Lourenço A, Nash R, Veuthey AL,Wiegers T, Winter AG.

Database (Oxford). 2012 Apr; 2012:bas020

PMID: 22513129

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3328793